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 Orchid Genome and Transcriptome Home

IMPOTANT
Currently, ftp download through the web is not supported due to security issues. 

One way is to copy the link address and paste it into explorer and download it.

Our staff are working on correcting this issue, but we do not have an estimate for when it will be resolved. 

Please do not hesitate to contact me if you need the data below before the download method is improved.

okokookk219@gmail.com

What is Cymbidium goeringii?

Cymbidium goeringii, commonly known as the spring orchid, has long been favored for horticultural purposes in Asian countries. It is a popular orchid with much demand of improvement and development for its valuable varieties. 

 

Cymbidium goeringii genome 

Genome sequence

 

Cymbidium goeringii Gene sets (29,556 genes)

CDS file

PEP file

Gene annotation file

 

Cymbidium goeringii Repeat

Repeat annotation file

 

Phylogenetic tree

Phylogenetic tree

 

Cymbidium goeringii BUSCO

BUSCO output for genome

BUSCO output for proteins

Cymbidium goeringii MADS-box domain
CGOE.MADS-box.fa


Cymbidium goeringii RNA aligned reads (bam)

Flower, Flowerbud, Fruit, Root, Stem

 

Cymbidium macrorrhizum RNA aligned reads (bam)

Flower, Flowerbud, Immature fruit, Fruit, Root, Stem

 

 What is Orchidomics?
Orchid genomes Orchid transcriptomes
  • Spring orchid genome
 Orchid genome data

 

SeeAlso

 

External Links